Short-Range Migration Can Alter Evolutionary Dynamics in Solid Tumors

Behind the paper

Written by Youness Azimzade - September 23, 2019

Short-Range Migration Can Alter Evolutionary Dynamics in Solid Tumors

Youness Azimzade, Abbas Ali Saberi

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I have always been fascinated by how movement behavior of species affects their encounters. These encounters should be able to affect the dynamics of populations in larger scale. For tumors, existence of infiltrative edge suggests that we have short range migration and respectively, I wanted to see how those migrations affect evolutionary dynamics in solid tumors. To tackle this problem we developed a discrete border driven model for tumor growth. Cells in this model can migrate and duplicate if they have empty unit in their nearest neighbors. Similar to two species Eden model, we consider two populations, (A) and (B), which are living on a 2D or 3D lattice and each unit can be empty or occupied by only one species. Then we study these populations in two different scenarios, identical case and non-identical case. The identical case represents two similar populations with the same fitness where their evolution is based on neutral evolution. The non-identical case represents two populations with different fitness.

To introduce temporal evolution, we randomly choose a unit. If the unit is occupied, in identical scenario both populations will be updated according to the same rules as following: i) cell decide to duplicate into an empty neighbor unit with the probability of R and would do so if that unit is occupiable. We fixed R=0.1 in the whole paper. ii) If the cell does not duplicate, it decides to migrate to an empty neighbor unit with a probability of d and does so if the selected unit is occupiable. iii) Any unit would be occupiable after N times being selected for occupation through migration or duplication. N represents the crowdedness of the environment and its effect is similar to the noise reduction process in previous studies. Hitting represents cells effort to deform and displace host tissues components and pave their way for migration/duplication. If we set d=N=0, our model would be the Eden model with two species. Non-identical scenario considers the fitness difference between cells. Fitness difference is not significant and typically can be considered about 10 percent. To incorporate a typical fitness difference, we consider (B) to have a slight advantage in reproduction rate as R_B=1.1 R_A=0.11.

Figure 1: Structure of the model Structure of the model

Our model prediction about the role of short-range migration is in line with recent findings on the effect of physical parameters on natural selection in bacterial colonies. Based on one of these studies, the collective migration of cells conceals fitness differences. However, our result predicts that even non-collective migration can increase the competition chance for the population with smaller fitness. FIG 2 depicts how such migration changes the efficiency of natural selection. In standard Eden model with R_B=1.1 R_A, (B) finally takes over the entire invasion front (FIG 2(a)). Adding removable physical barrier accelerates the fixation of (B) (FIG 2 (b)) and adding short-range migration weakens natural selection (FIG 2(c)).

Figure 2: Natural selection in presence of short range migration Natural selection in presence of short range migration

Our findings can be applied to different cellular aggregates such as bacterial colonies and tumors. However, we use this model to address the evolutionary dynamics in solid tumors. To show our findings in the context of tumor evolution, we use our 3D model to imitate tumor growth. We consider 3000 cells of (A) and (B) randomly positioned in the center of the 3D medium and let them grow according to the aforementioned rules. For two similar populations, both of them will appear at the surface and probable fixation is unlikely to happen due to the geometry of the tumor ( see FIG 3(a)). Then we consider the non-identical scenario with R_B=1.1 R_A. Based on the neutral theory, (A) should actively participate in the growth and should be present at the border of the tumor, in spite of having lower fitness. Based on Darwinian evolution, (B) is dominant and it will take over the whole tumor and will be the only population active in the border. For the Eden model, as FIG 3(b) shows, (A) has a chance to appear at the border but finally it will be captured inside the tumor as the tumor becomes larger. When we add environmental barrier, the situation for (A) becomes worse and it will be run out of border faster (FIG 3(c)). However, when we add short-range migration by keeping N=10, the situation becomes completely different. First, two populations, as FIG 3(d) shows, became well-mixed. Then, in spite of being mixed, natural selection is not effective as before and (A) remains active in the border and participates in tumor evolution. Interestingly, while the dynamics of sub-clones has changed, the morphology of the tumor remains almost the same.

Figure 3: Evolutionary Dynamics of Tumor in presence of short-range migration Evolutionary Dynamics of Tumor in presence of short-range migration

Our results provide evidence for the possibility of violation of natural selection in well-mixed populations. These findings can be verified, thank recent experimental advancements.

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